Basic Information
Locus ID:
nbis-gene-46049
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00096.1 | 489508 | 500206 | + | nbis-gene-46049 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.93 | 127,060.18 Da | 56.22 | 79.23 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 370 | 454 | 5.1E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 345 | 456 | 1.97E-18 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 889 | 1136 | 1.96E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 877 | 1146 | 1.7E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 539 | 8.5E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 442 | 2.9E-21 | - |
| SMART | SM00219 | tyrkin_6 | 366 | 556 | 1.7E-4 | IPR020635 |
| SMART | SM00369 | LRR_typ_2 | 914 | 937 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 960 | 984 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1027 | 1051 | 140.0 | IPR003591 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 394 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 850 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 269 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35960.2 | - | 0 |
| RefSeq | XP_025791245.1 | probable inactive leucine-rich repeat receptor kinase XIAO [Panicum hallii] | 0 |
| C0LGG7 | Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana OX=3702 GN=At1g53420 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UL33 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26254 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology