Basic Information
Locus ID:
nbis-gene-45984
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00096.1 | 200584 | 202548 | + | nbis-gene-45984 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 36,890.55 Da | 49.72 | 80.47 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07887 | Calmodulin binding protein-like | 121 | 273 | 2.1E-17 | IPR012416 |
| Gene3D | G3DSA:6.10.250.3110 | - | 35 | 123 | 7.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 50 | - | - |
| Coils | Coil | Coil | 49 | 94 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015694641.2 | calmodulin-binding protein 60 B-like isoform X1 [Oryza brachyantha] | 0 |
| TrEMBL | J3ML41 | Calmodulin_bind domain-containing protein OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2165, CH04.2588, CH06.2103 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0306700.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_058377, gene-QYE76_058984, gene-QYE76_058985 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G255700, gene-BS78_05G255800 |
| Poaceae | Thinopyrum elongatum | 7 | Tel3E01G641200, Tel3E01G641300, Tel3E01G896700 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3BG086480, gene_TRIDC3BG086490 |
| Poaceae | Triticum aestivum | 5 | TraesCS3A02G403500.1, TraesCS3B02G600600.1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-45984, nbis-gene-45985 |