Basic Information
Locus ID:
nbis-gene-45855
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Fasciclin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00095.1 | 472197 | 475326 | + | nbis-gene-45855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 43,798.18 Da | 46.00 | 88.77 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 199 | 330 | 3.3E-13 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 30 | 160 | 9.81E-15 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 193 | 330 | 5.89E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 24 | 174 | 1.3E-7 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 195 | 330 | 3.0E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 225 | 331 | 1.4E-14 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 24 | 173 | 8.637811 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 186 | 328 | 11.18565 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 389 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_052165517.1 | fasciclin-like arabinogalactan protein 1 [Oryza glaberrima] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9T5K6 | FAS1 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_49869 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology