Basic Information
Locus ID:
nbis-gene-45425
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00092.1 | 1130443 | 1133928 | - | nbis-gene-45425 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 25,107.06 Da | 31.33 | 77.89 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50044 | SH3-domain | 147 | 227 | 8.66E-9 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 53 | 142 | 7.32E-5 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 131 | 227 | 2.4E-7 | - |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 186 | 227 | 14.408291 | IPR001452 |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 121 | 148 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.3 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_015612895.1 | SH3 domain-containing protein 2 [Oryza sativa Japonica Group] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0EZV0 | SH3 domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology