Basic Information
Locus ID:
nbis-gene-44909
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00090.1 | 557842 | 559619 | + | nbis-gene-44909 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 33,066.32 Da | 49.90 | 73.23 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 258 | 297 | 4.0E-8 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 256 | 303 | 4.58E-10 | - |
| SUPERFAMILY | SSF81901 | HCP-like | 127 | 185 | 1.7E-5 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 246 | 302 | 3.4E-11 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 116 | 217 | 5.6E-6 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 255 | 297 | 11.032289 | IPR002893 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_025823138.1 | F-box protein At5g50450-like [Panicum hallii] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TRJ7 | MYND-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_37437 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology