Basic Information
Locus ID:
nbis-gene-44472
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00088.1 | 415090 | 423163 | - | nbis-gene-44472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 44,129.64 Da | 36.31 | 78.39 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 223 | 373 | 3.1E-41 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 221 | 385 | 3.53E-42 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 207 | 389 | 4.0E-53 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 223 | 397 | 23.036926 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 224 | 239 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_002442564.2 | ubiquitin carboxyl-terminal hydrolase 8 [Sorghum bicolor] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9WLX9 | Ubiquitin carboxyl-terminal hydrolase OS=Eragrostis curvula OX=38414 GN=EJB05_00264 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology