Basic Information
Locus ID:
nbis-gene-44144
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00086.1 | 1072381 | 1076696 | + | nbis-gene-44144 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.61 | 61,405.99 Da | 36.97 | 91.33 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 198 | 233 | 1.6E-6 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 191 | 441 | 4.45E-32 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 7 | 184 | 1.92E-14 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 188 | 235 | 5.5E-10 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 104 | 187 | 5.7E-10 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 236 | 442 | 3.6E-20 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 8 | 103 | 1.3E-7 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 9 | 442 | 20.322239 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58170.1 | SHV3-like 5. | 0 |
| RefSeq | XP_020407208.1 | uncharacterized protein LOC100304242 isoform X4 [Zea mays] | 0 |
| Q9LVN0 | Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 GN=GDPDL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SST3 | glycerophosphodiester phosphodiesterase OS=Eragrostis curvula OX=38414 GN=EJB05_52553 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology