Basic Information
Locus ID:
nbis-gene-44088
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00086.1 | 820998 | 826876 | - | nbis-gene-44088 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 21,013.88 Da | 41.62 | 105.37 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 80 | 182 | 3.92E-8 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 188 | 2.6E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.2 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_022679127.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X2 [Setaria italica] | 0 |
| TrEMBL | A0A5J9V9Y3 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_24684 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035048 |
| Arecaceae | Cocos nucifera | 1 | COCNU_03G003140 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G29654.1 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g19770.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB03g043510.2N, BniB06g049840.2N, BniB07g004410.2N |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G0586, Ceq07G0670, Ceq07G0689 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl07G0667, Cgl07G0681 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0300088 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44088 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12693 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19761 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.734 |