Basic Information
Locus ID:
nbis-gene-43920
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00086.1 | 139676 | 140071 | - | nbis-gene-43920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 14,289.24 Da | 22.33 | 75.19 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 12 | 111 | 2.60139E-23 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 113 | 2.45E-25 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 3 | 114 | 3.3E-24 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1 | 111 | 12.950217 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012704458.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 0 |
| TrEMBL | A0A5J9SG62 | MATH domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56644 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0111710, gene-QOZ80_2AG0117420 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr14G006490, Chr18G008260, Chr18G008270, Chr18G008280 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-43920 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g15244 |