Basic Information
Locus ID:
nbis-gene-43199
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00080.1 | 1161547 | 1174575 | + | nbis-gene-43199 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 117,027.22 Da | 53.03 | 66.57 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 165 | 260 | 2.73623E-46 | - |
| Pfam | PF00564 | PB1 domain | 178 | 262 | 7.4E-19 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 893 | 941 | 1.5E-6 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 942 | 1055 | 3.4E-26 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 177 | 263 | 1.26E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 892 | 1053 | 3.99E-42 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 180 | 263 | 2.4E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 935 | 1067 | 9.6E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 883 | 934 | 3.6E-10 | - |
| SMART | SM00666 | PB1_new | 176 | 263 | 1.2E-31 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 783 | 1059 | 14.77499 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_034582258.1 | serine/threonine-protein kinase STE20-like [Setaria viridis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VUC4 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_12921 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology