Basic Information
Locus ID:
nbis-gene-43180
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00080.1 | 918806 | 957735 | - | nbis-gene-43180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 47,375.88 Da | 39.23 | 80.21 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 118 | 228 | 9.0492E-11 | IPR002083 |
| CDD | cd14736 | BACK_AtBPM-like | 365 | 431 | 1.90731E-25 | IPR034090 |
| Pfam | PF00651 | BTB/POZ domain | 260 | 370 | 1.7E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 118 | 233 | 2.29E-14 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 248 | 370 | 4.32E-28 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 246 | 367 | 6.2E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 114 | 231 | 8.8E-11 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 373 | 435 | 2.3E-23 | - |
| SMART | SM00225 | BTB_4 | 269 | 373 | 6.2E-16 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 269 | 330 | 15.969549 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025801380.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VV42 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12909 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology