halophFGD

Basic Information

Locus ID: nbis-gene-43158

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: Broad-Complex, Tramtrack and Bric a brac

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00080.1	681615	683720	+	nbis-gene-43158

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.60	29,275.48 Da	58.45	67.38	-0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	43	85	5.67724E-6	IPR002083
Pfam	PF00651	BTB/POZ domain	145	217	8.0E-14	IPR000210
SUPERFAMILY	SSF54695	POZ domain	145	220	2.72E-14	IPR011333
SUPERFAMILY	SSF49599	TRAF domain-like	41	90	3.92E-9	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	42	105	1.1E-5	IPR008974
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	140	223	3.8E-18	IPR011333
ProSiteProfiles	PS50097	BTB domain profile.	146	204	10.716321	IPR000210
MobiDBLite	mobidb-lite	consensus disorder prediction	118	140	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G06190.5	-
RefSeq	XP_004980769.1	BTB/POZ and MATH domain-containing protein 2 [Setaria italica]
Swiss-Prot	Q9M8J9	BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1
TrEMBL	A0A5J9UKV3	BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26579 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for nbis-gene-43158.