HalophFGD

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Basic Information
Locus ID: nbis-gene-43120
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00080.1 483484 485475 - nbis-gene-43120
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.74 37,188.81 Da 36.78 102.14 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52047 RNI-like 57 265 2.94E-11 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 11 328 2.1E-11 IPR032675
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025826646.1 MEIOTIC F-BOX protein MOF-like [Panicum hallii] 0
TrEMBL A0A3L6PLV1 F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM18G10800 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 1 Sgl51268
Poaceae Echinochloa crus-galli 31 AH01.1527, AH03.669, AH03.670, AH04.1884, AH04.1885 ...
AH09.1070, AH09.1072, AH09.1074, BH03.797, BH03.798, BH04.1916, BH04.1917, BH04.1918, BH07.1796, BH09.1149, BH09.1150, BH09.1151, BH09.1153, BH09.1154, BH09.1155, BH09.1160, BH09.1161, CH03.890, CH03.891, CH04.2256, CH04.2258, CH09.1281, CH09.1282, CH09.1287, CH09.1288, CH09.1291
Poaceae Eleusine coracana subsp. coracana 16 gene-QOZ80_4AG0316660, gene-QOZ80_4AG0316670 ...
gene-QOZ80_4AG0316700, gene-QOZ80_4BG0347870, gene-QOZ80_4BG0347880, gene-QOZ80_4BG0347890, gene-QOZ80_4BG0347900, gene-QOZ80_4BG0347930, gene-QOZ80_4BG0347950, gene-QOZ80_4BG0347960, gene-QOZ80_4BG0347980, gene-QOZ80_5BG0448010, gene-QOZ80_9AG0688290, gene-QOZ80_9AG0688310, gene-QOZ80_9BG0716770, gene-QOZ80_9BG0716790
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.2HG0113350.1, HORVU.MOREX.r3.2HG0173930.1 ...
HORVU.MOREX.r3.3HG0324350.1, HORVU.MOREX.r3.3HG0329080.1, HORVU.MOREX.r3.4HG0398330.1, HORVU.MOREX.r3.5HG0515150.1.CDS1, HORVU.MOREX.r3.6HG0597680.1, HORVU.MOREX.r3.6HG0624800.1, HORVU.MOREX.r3.6HG0632670.1
Poaceae Lolium multiflorum 36 gene-QYE76_002125, gene-QYE76_020252, gene-QYE76_022723 ...
gene-QYE76_023887, gene-QYE76_026800, gene-QYE76_026837, gene-QYE76_027447, gene-QYE76_033845, gene-QYE76_037310, gene-QYE76_037658, gene-QYE76_041415, gene-QYE76_042114, gene-QYE76_044147, gene-QYE76_044148, gene-QYE76_044157, gene-QYE76_044162, gene-QYE76_044163, gene-QYE76_044165, gene-QYE76_044169, gene-QYE76_044410, gene-QYE76_049203, gene-QYE76_049852, gene-QYE76_049855, gene-QYE76_049903, gene-QYE76_050002, gene-QYE76_050338, gene-QYE76_050339, gene-QYE76_052080, gene-QYE76_053870, gene-QYE76_053871, gene-QYE76_053872, gene-QYE76_064570, gene-QYE76_065702, gene-QYE76_065784, gene-QYE76_068864, gene-QYE76_070044
Poaceae Oryza coarctata 11 Oco03G024970, Oco07G001490, Oco07G006480, Oco07G006490 ...
Oco07G006500, Oco07G007900, Oco07G007930, Oco08G001880, Oco08G006450, Oco08G007830, Oco08G007840
Poaceae Oryza sativa 12 LOC_Os04g12990.1, LOC_Os04g13010.1, LOC_Os04g13040.1 ...
LOC_Os04g35930.1, LOC_Os04g35940.1, LOC_Os04g35970.1, LOC_Os04g35990.1, LOC_Os04g36000.1, LOC_Os04g36010.1, LOC_Os04g36020.1, LOC_Os04g39070.1, LOC_Os04g39080.1
Poaceae Paspalum vaginatum 15 gene-BS78_02G107100, gene-BS78_05G186700, gene-BS78_K330000 ...
gene-BS78_05G199600, gene-BS78_05G199700, gene-BS78_05G199800, gene-BS78_05G199900, gene-BS78_05G200500, gene-BS78_05G200600, gene-BS78_05G232700, gene-BS78_06G104100, gene-BS78_06G104200, gene-BS78_06G104300, gene-BS78_06G104400, gene-BS78_06G104500
Poaceae Puccinellia tenuiflora 17 Pt_Chr0103073, Pt_Chr0103074, Pt_Chr0103075, Pt_Chr0103076 ...
Pt_Chr0104117, Pt_Chr0104119, Pt_Chr0104120, Pt_Chr0104121, Pt_Chr0106209, Pt_Chr0205341, Pt_Chr0303820, Pt_Chr0401094, Pt_Chr0603374, Pt_Chr0604531, Pt_Chr0604666, Pt_Chr0604788, Pt_Chr0702465
Poaceae Sporobolus alterniflorus 7 Chr01G024980, Chr07G015020, Chr23G012520, Chr26G001820 ...
Chr26G007020, Chr28G003530, Chr31G007750
Poaceae Thinopyrum elongatum 7 Tel4E01G435000, Tel5E01G653900, Tel5E01G886800 ...
Tel5E01G887200, Tel6E01G444600, Tel6E01G496200, Tel6E01G642500
Poaceae Triticum dicoccoides 18 gene_TRIDC2AG013410, gene_TRIDC2BG016320 ...
gene_TRIDC2BG047580, gene_TRIDC3AG074830, gene_TRIDC3BG082940, gene_TRIDC3BG086190, gene_TRIDC4AG006730, gene_TRIDC4AG047810, gene_TRIDC4BG044480, gene_TRIDC5AG060400, gene_TRIDC5BG083260, gene_TRIDC6AG035930, gene_TRIDC6AG054100, gene_TRIDC6AG054120, gene_TRIDC6BG023840, gene_TRIDC6BG042610, gene_TRIDC6BG063040, gene_TRIDC6BG063060
Poaceae Triticum aestivum 30 TraesCS1B02G030200.1, TraesCS2B02G325900.1 ...
TraesCS2B02G346600.1, TraesCS2D02G112100.1, TraesCS2D02G307200.1, TraesCS3A02G493200.1, TraesCS3A02G518400.1, TraesCS3A02G529000.1, TraesCS3B02G585800.1, TraesCS3B02G585900.1, TraesCS3B02G598000.1, TraesCS3D02G534300.1, TraesCS4A02G048500.1, TraesCS4A02G048600.1.cds1, TraesCS4A02G316100.1, TraesCS4A02G325200.2, TraesCS4B02G256300.1, TraesCS4D02G364300.1, TraesCS5A02G417200.1, TraesCS5B02G538000.1, TraesCS5D02G425300.1, TraesCS5D02G566400.1, TraesCS6B02G260300.1, TraesCS6B02G297100.1, TraesCS6B02G394600.1, TraesCS6D02G122700.1, TraesCS6D02G215800.1, TraesCS6D02G245100.1, TraesCS6D02G405500.1, TraesCS7A02G139700.1
Poaceae Zea mays 3 Zm00001eb082190_P001, Zm00001eb082200_P001 ...
Zm00001eb082210_P002
Poaceae Zoysia japonica 1 nbis-gene-43120
Poaceae Zoysia macrostachya 1 Zma_g18169
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-17868
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-2945
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-17858
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