Basic Information
Locus ID:
nbis-gene-4296
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 4751408 | 4756257 | - | nbis-gene-4296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 53,633.78 Da | 51.37 | 78.61 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 354 | 460 | 3.1E-11 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 72 | 114 | 3.7E-9 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 54 | 68 | 0.84 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 300 | 342 | 1.86E-5 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 460 | 9.65E-24 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 151 | 4.76E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 311 | 488 | 1.1E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 165 | 1.4E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 53 | 76 | 7.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 77 | 100 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 4 | 30 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 320 | 461 | 0.0063 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 101 | 123 | 56.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 103 | 125 | 7.557941 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 187 | 463 | 8.6267 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 291 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_025795857.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7CGR2 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G588500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology