Basic Information
Locus ID:
nbis-gene-42646
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00078.1 | 440742 | 443657 | - | nbis-gene-42646 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 46,844.87 Da | 41.03 | 78.34 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 255 | 300 | 7.05259E-9 | - |
| CDD | cd00121 | MATH | 55 | 164 | 5.99873E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 184 | 215 | 1.2E-4 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 171 | 252 | 5.76E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 38 | 169 | 6.54E-15 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 37 | 166 | 1.7E-15 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 167 | 217 | 3.4E-11 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 218 | 285 | 1.2E-13 | IPR011333 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 39 | 164 | 9.677321 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 193 | 217 | 9.268581 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_012702339.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T2B2 | BTB domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_48138 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology