Basic Information
Locus ID:
nbis-gene-42603
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00078.1 | 257779 | 260441 | + | nbis-gene-42603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.92 | 75,926.32 Da | 46.50 | 81.45 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 198 | 259 | 1.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 104 | 148 | 8.5E-13 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 104 | 292 | 4.91E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 483 | 677 | 3.82E-17 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 448 | 549 | 5.7E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 550 | 677 | 1.7E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 220 | 309 | 3.1E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 105 | 219 | 3.2E-20 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 332 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025821916.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Panicum hallii] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T195 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48288 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology