Basic Information
Locus ID:
nbis-gene-42574
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00078.1 | 142825 | 145215 | + | nbis-gene-42574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.77 | 56,110.96 Da | 43.59 | 82.02 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 114 | 413 | 8.3E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 109 | 418 | 2.16E-91 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 226 | 446 | 1.4E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 110 | 200 | 8.9E-30 | - |
| SMART | SM00220 | serkin_6 | 114 | 413 | 5.0E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 114 | 413 | 43.919296 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 120 | 143 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 250 | 262 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 107 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76540.1 | cyclin-dependent kinase B2;1. Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. | 0 |
| RefSeq | XP_020399874.1 | cyclin-dependent kinase B2-1 [Zea mays] | 0 |
| Q0J4I1 | Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB2-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5VCP0 | Cyclin-dependent kinase B2-1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016054 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology