Basic Information
Locus ID:
nbis-gene-42352
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00076.1 | 852348 | 862365 | - | nbis-gene-42352 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.67 | 29,209.23 Da | 41.02 | 75.67 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 174 | 226 | 8.4E-6 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 41 | 135 | 1.3E-21 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 170 | 236 | 2.35E-6 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 135 | 2.62E-26 | IPR035927 |
| Gene3D | G3DSA:3.30.2230.10 | - | 12 | 142 | 3.8E-31 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 151 | 243 | 1.7E-10 | - |
| SMART | SM00695 | dusp | 37 | 140 | 2.6E-17 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 137 | 17.961042 | IPR006615 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 99 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_025792927.1 | ubiquitin carboxyl-terminal hydrolase 9-like [Panicum hallii] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9V6N9 | Ubiquitinyl hydrolase 1 OS=Eragrostis curvula OX=38414 GN=EJB05_22854 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology