Basic Information
Locus ID:
nbis-gene-42299
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Glycosyl hydrolases family 38 C-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00076.1 | 342249 | 354979 | - | nbis-gene-42299 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 14,548.28 Da | 17.38 | 105.42 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 63 | 110 | 4.0E-12 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 18 | 127 | 1.73E-33 | IPR011013 |
| Gene3D | G3DSA:2.70.98.30 | - | 10 | 64 | 4.4E-13 | - |
| Gene3D | G3DSA:2.70.98.30 | - | 65 | 130 | 1.4E-23 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.3 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_038973747.1 | alpha-mannosidase-like isoform X6 [Phoenix dactylifera] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A317YJL7 | Alpha-mannosidase OS=Zea mays OX=4577 GN=MANA_3 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology