Basic Information
Locus ID:
nbis-gene-42235
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
CIPK10
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00075.1 | 1242961 | 1244328 | + | nbis-gene-42235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 18,884.34 Da | 34.67 | 76.61 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 52 | 147 | 1.0003E-34 | - |
| Pfam | PF03822 | NAF domain | 50 | 88 | 2.5E-7 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 62 | 2.34E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 34 | 152 | 5.2E-31 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58380.1 | SOS3-interacting protein 1. Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. | 0 |
| RefSeq | NP_001389440.1 | cBL-interacting protein kinase 18 [Oryza sativa Japonica Group] | 0 |
| Q5W736 | CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK18 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9U6E5 | NAF domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg23780, jg38045 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044402 |
| Apiaceae | Apium graveolens | 2 | Ag4G00083, Ag7G00826 |
| Brassicaceae | Brassica nigra | 2 | BniB02g006070.2N, BniB05g034970.2N |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G27213 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_051070, gene-QYE76_057146 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-1641, nbis-gene-1642, nbis-gene-42235 |
| Rhizophoraceae | Kandelia candel | 6 | add.evm.TU.utg000008l.472, add.evm.TU.utg000009l.222 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu25291 |