Basic Information
Locus ID:
nbis-gene-41580
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00071.1 | 983843 | 993133 | - | nbis-gene-41580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 64,178.33 Da | 60.70 | 70.20 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 386 | 586 | 3.8E-23 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 281 | 354 | 8.83E-10 | IPR036047 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 16 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 173 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02360.1 | phloem protein 2-B10. | 0 |
| RefSeq | XP_039852836.1 | F-box protein PP2-B10-like [Panicum virgatum] | 0 |
| Q9ZVQ6 | F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6RGQ1 | F-box protein PP2-B10-like OS=Panicum miliaceum OX=4540 GN=C2845_PM13G03080 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology