Basic Information
Locus ID:
nbis-gene-41565
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00071.1 | 941051 | 944785 | + | nbis-gene-41565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 57,973.02 Da | 55.08 | 72.63 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 234 | 276 | 5.3E-5 | IPR001810 |
| Pfam | PF14299 | Phloem protein 2 | 336 | 525 | 3.2E-33 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 221 | 277 | 5.72E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 220 | 308 | 2.8E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 226 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02250.1 | phloem protein 2-B2. | 0 |
| RefSeq | XP_039852836.1 | F-box protein PP2-B10-like [Panicum virgatum] | 0 |
| Q9ZVR5 | Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2 | 0 | |
| TrEMBL | A0A5J9W5V4 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_09793 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology