Basic Information
Locus ID:
nbis-gene-41440
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00071.1 | 441675 | 444559 | + | nbis-gene-41440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 73,201.61 Da | 37.76 | 96.03 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 421 | 681 | 2.37324E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 420 | 681 | 6.0E-36 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 206 | 1.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 71 | 7.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 241 | 1.08E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 396 | 681 | 1.28E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 143 | 5.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 265 | 9.7E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 493 | 2.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 685 | 1.5E-38 | - |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 9.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 216 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 685 | 27.0009 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 286 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025821391.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Panicum hallii] | 0 |
| Q9FXF2 | Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana OX=3702 GN=RKF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W6Q3 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10086 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology