Basic Information
Locus ID:
nbis-gene-41108
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00069.1 | 1144568 | 1145707 | - | nbis-gene-41108 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 40,271.18 Da | 52.23 | 77.52 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 175 | 220 | 1.0E-12 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 137 | 172 | 2.6E-7 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 89 | 344 | 6.8E-40 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 75 | 365 | 2.9E-39 | IPR015915 |
| SMART | SM00612 | kelc_smart | 187 | 234 | 1.2E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 137 | 186 | 7.5E-8 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_012700569.1 | LOW QUALITY PROTEIN: F-box/kelch-repeat protein At1g80440-like [Setaria italica] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9T9N5 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_41423 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology