Basic Information
Locus ID:
nbis-gene-40816
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00068.1 | 1481140 | 1482102 | + | nbis-gene-40816 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 33,479.89 Da | 37.12 | 57.19 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 82 | 312 | 5.76243E-116 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 22 | 61 | 1.1155E-17 | - |
| Pfam | PF00187 | Chitin recognition protein | 23 | 60 | 2.3E-12 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 81 | 312 | 1.4E-135 | IPR000726 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 23 | 67 | 3.01E-11 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 78 | 319 | 8.44E-110 | IPR023346 |
| Gene3D | G3DSA:1.10.530.10 | - | 86 | 318 | 1.6E-122 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 21 | 63 | 2.6E-14 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 164 | 221 | 1.6E-122 | - |
| SMART | SM00270 | ChitinBD_3 | 23 | 60 | 8.9E-15 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 319 | 1.5E-127 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 21 | 62 | 10.920639 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 99 | 121 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 33 | 52 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 225 | 235 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 39 | 46 | 5.4E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 31 | 39 | 5.4E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 46 | 53 | 5.4E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_047055504.1 | chitinase 1-like [Lolium rigidum] | 0 |
| Q42993 | Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0KF33 | chitinase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology