Basic Information
Locus ID:
nbis-gene-40642
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00068.1 | 808281 | 809546 | - | nbis-gene-40642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 46,395.56 Da | 41.12 | 90.57 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 82 | 385 | 7.4E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 394 | 1.19E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 174 | 395 | 1.8E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 173 | 6.4E-8 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 385 | 27.636929 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20930.1 | cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. | 0 |
| RefSeq | XP_039841101.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 0 |
| Q03114 | Cyclin-dependent kinase 5 OS=Rattus norvegicus OX=10116 GN=Cdk5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835FYS5 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_001207 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4BG0329520, gene-QOZ80_6BG0502780 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G032360, Chr05G001370, Chr18G010500 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-40642, nbis-gene-55776, nbis-gene-59079 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g31049, Zma_g33307 |