Basic Information
Locus ID:
nbis-gene-40032
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Cation efflux family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00066.1 | 1457088 | 1459634 | - | nbis-gene-40032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 45,765.30 Da | 48.94 | 100.15 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 312 | 386 | 6.2E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 114 | 305 | 3.4E-26 | IPR002524 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 105 | 307 | 4.05E-40 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 310 | 386 | 4.97E-15 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 111 | 305 | 2.5E-38 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 315 | 403 | 9.8E-17 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 111 | 386 | 3.1E-31 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58060.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_025798980.1 | metal tolerance protein 3-like [Panicum hallii] | 0 |
| Q6Z7K5 | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9CZN2 | ZT_dimer domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology