Basic Information
Locus ID:
nbis-gene-39674
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00065.1 | 1349655 | 1351055 | + | nbis-gene-39674 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.32 | 51,284.44 Da | 61.74 | 83.16 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12678 | RING-H2 zinc finger domain | 416 | 457 | 8.4E-8 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 408 | 462 | 2.5E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 391 | 466 | 9.7E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 417 | 456 | 0.0073 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 417 | 457 | 10.748424 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 192 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 0 |
| TrEMBL | A0A2S3I0K8 | RING-type domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G051500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology