Basic Information
Locus ID:
nbis-gene-39672
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
E3 ubiquitin protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00065.1 | 1342430 | 1343284 | + | nbis-gene-39672 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.01 | 30,065.89 Da | 92.82 | 63.73 | -0.54 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30580.3 | - | 0 |
| RefSeq | XP_037443335.1 | E3 ubiquitin protein ligase DRIP2-like [Triticum dicoccoides] | 0 |
| Q94AY3 | E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453LR77 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg25168, Sbi_jg9010 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19581 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl42444, Sgl47173 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g12630.v2.2 |
| Poaceae | Echinochloa crus-galli | 1 | BH03.507 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-20398, nbis-gene-39672, nbis-gene-39673 |