Basic Information
Locus ID:
nbis-gene-3962
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 3347242 | 3349708 | + | nbis-gene-3962 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 43,402.48 Da | 92.47 | 56.52 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 265 | 286 | 2.89E-6 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 262 | 290 | 2.3E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 412 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34440.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039828867.1 | proline-rich receptor-like protein kinase PERK5 [Panicum virgatum] | 0 |
| Q8GX23 | Proline-rich receptor-like protein kinase PERK5 OS=Arabidopsis thaliana OX=3702 GN=PERK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811MAC3 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS1011 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 4 | Ag6G02584, Ag7G01257, Ag9G00050, Ag9G00100 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-16347, nbis-gene-3962 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1046 |