Basic Information
Locus ID:
nbis-gene-39601
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00065.1 | 868195 | 873953 | + | nbis-gene-39601 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 69,211.13 Da | 46.75 | 93.69 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 212 | 467 | 2.4E-94 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 28 | 114 | 2.4E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 114 | 1.65E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 16 | 134 | 1.6E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 29 | 125 | 0.0032 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 491 | 92.640572 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 12.102015 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 623 | - | - |
| Coils | Coil | Coil | 598 | 618 | - | - |
| Coils | Coil | Coil | 532 | 566 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_034572905.1 | BTB/POZ domain-containing protein At1g30440 isoform X1 [Setaria viridis] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0A9EW45 | BTB/POZ domain-containing protein At1g30440-like OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology