Basic Information
Locus ID:
nbis-gene-39268
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00064.1 | 286694 | 287908 | + | nbis-gene-39268 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 28,628.19 Da | 52.81 | 78.50 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 76 | 152 | 3.06714E-45 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 83 | 128 | 3.7E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 82 | 153 | 9.55E-19 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 71 | 156 | 3.5E-18 | IPR036638 |
| SMART | SM00353 | finulus | 85 | 134 | 5.6E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 79 | 128 | 17.389959 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 49 | - | - |
| Coils | Coil | Coil | 125 | 152 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17880.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_034575030.1 | transcription factor MYC2-like [Setaria viridis] | 0 |
| Q336P5 | Transcription factor MYC2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V7Q6 | BHLH domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_23253 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology