Basic Information
Locus ID:
nbis-gene-39166
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00063.1 | 1435089 | 1439677 | + | nbis-gene-39166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 71,866.81 Da | 48.86 | 90.94 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 215 | 480 | 2.6E-96 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 116 | 3.8E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 18 | 131 | 1.1E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 16 | 171 | 1.3E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 29 | 127 | 2.4E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 99 | 11.957241 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 215 | 504 | 95.80191 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 616 | - | - |
| Coils | Coil | Coil | 546 | 580 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_025820258.1 | BTB/POZ domain-containing protein At1g30440-like [Panicum hallii] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9W5P7 | NPH3 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_09964 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology