Basic Information
Locus ID:
nbis-gene-38939
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00063.1 | 387324 | 388866 | + | nbis-gene-38939 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 43,094.66 Da | 40.20 | 91.91 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052166588.1 | uncharacterized protein LOC127783368 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0A8Y5D3 | Secreted protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 3 | Oco15G003440, Oco16G003390, Oco16G003400 |
| Poaceae | Oryza sativa | 3 | LOC_Os08g08340.1, LOC_Os08g08420.1, LOC_Os08g08430.1 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr20G012150, Chr20G012180, Chr29G010510, Chr29G010530 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-38939, nbis-gene-38941, nbis-gene-38942 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g22579, Zma_g22580, Zma_g22582, Zma_g22583 |