Basic Information
Locus ID:
nbis-gene-38900
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00063.1 | 168380 | 169678 | + | nbis-gene-38900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 47,901.58 Da | 46.77 | 71.55 | -0.46 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974370.1 | uncharacterized protein LOC101784095 [Setaria italica] | 0 |
| TrEMBL | A0A1E5V970 | DUF295 domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_09G005530 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103697832, gene-LOC120110584 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.542.V1.1 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00001661, Pov_00025652 |
| Poaceae | Echinochloa crus-galli | 16 | AH02.3082, AH02.935, AH04.571, AH05.2135, AH06.2064 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0140480, gene-QOZ80_2BG0196120 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0073170.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_014340 |
| Poaceae | Oryza coarctata | 6 | Oco03G017820, Oco03G017830, Oco04G018610, Oco15G003770 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g44990.1, LOC_Os02g45000.1, LOC_Os08g09360.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G109100, gene-BS78_04G227100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0504721, Pt_Chr0504723 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G023810, Chr20G012540 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G464900, Tel6E01G474200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG039140, gene_TRIDC6BG045940 |
| Poaceae | Triticum aestivum | 13 | TraesCS1A02G286700.1.cds1, TraesCS1A02G286800.1.cds1 ... |
| Poaceae | Zea mays | 11 | Zm00001eb171270_P001, Zm00001eb187050_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-14155, nbis-gene-38900, nbis-gene-9200 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14100 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3900 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2988 |