Basic Information
Locus ID:
nbis-gene-3881
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ribosomal protein S10p/S20e
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 2995245 | 2997606 | - | nbis-gene-3881 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 9,807.23 Da | 36.74 | 107.30 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 44 | 85 | 2.8E-8 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 28 | 86 | 1.83E-11 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 41 | 89 | 6.6E-17 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 29 | 85 | 0.0045 | IPR027486 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45030.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_014661210.1 | 40S ribosomal protein S20-2 [Setaria italica] | 0 |
| P49200 | Small ribosomal subunit protein uS10z/uS10x OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2 | 0 | |
| TrEMBL | A0A835BC22 | Ribosomal_S10 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_025220 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology