Basic Information
Locus ID:
nbis-gene-3863
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 2891954 | 2903779 | - | nbis-gene-3863 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 161,173.77 Da | 60.98 | 74.18 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 559 | 892 | 3.28218E-159 | - |
| Pfam | PF00069 | Protein kinase domain | 563 | 710 | 3.5E-27 | IPR000719 |
| Pfam | PF08694 | Ubiquitin-fold modifier-conjugating enzyme 1 | 1354 | 1464 | 1.3E-48 | IPR014806 |
| Pfam | PF00069 | Protein kinase domain | 767 | 872 | 6.7E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 553 | 893 | 3.24E-68 | IPR011009 |
| SUPERFAMILY | SSF54495 | UBC-like | 1354 | 1464 | 5.4E-33 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1349 | 1467 | 2.1E-51 | IPR016135 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 559 | 645 | 3.2E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 890 | 1.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 646 | 710 | 3.2E-38 | - |
| SMART | SM00220 | serkin_6 | 560 | 872 | 4.7E-73 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 560 | 872 | 40.937023 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 683 | 695 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1222 | 1242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 893 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 911 | 928 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53700.1 | WAG 1. The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. | 0 |
| RefSeq | XP_004984986.1 | serine/threonine-protein kinase WAG1 [Setaria italica] | 0 |
| Q9C8M5 | Serine/threonine-protein kinase WAG1 OS=Arabidopsis thaliana OX=3702 GN=WAG1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A368SV53 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_9G467200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg19184, jg21217, jg38219 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7659 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah007568 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg19004, Sbi_jg19005, Sbi_jg37430 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5271 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00015189 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl22424, Sgl27587 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009156, gene:ENSEOMG00000027290 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0017150, CQ.Regalona.r1.4BG0017570 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30164120 |
| Apiaceae | Apium graveolens | 1 | AgUnG01513 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G008650 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120109727 |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G19186, Ftri4G15082 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G53700.1, AT3G14370.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011428m.g.v1.0, Thhalv10020629m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g40240.v2.2, Sp3g12660.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g050730.2N, BniB06g026910.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G0849 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0976 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g30170, gene.Thate02g37970 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1062 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00008412 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G23158 |
| Poaceae | Echinochloa crus-galli | 2 | BH01.4625, CH01.4938 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0241360, gene-QOZ80_3BG0286740 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0391310.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_069244, gene-QYE76_069263 |
| Poaceae | Oryza coarctata | 2 | Oco05G008390, Oco06G008690 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g14840.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G415700 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0102071, Pt_Chr0102092 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr01G029710, Chr12G009800 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G687300, Tel4E01G386100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG011260, gene_TRIDC4BG039230 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G082200.1.cds1, TraesCS4B02G221800.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb010910_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-3863 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g1626, Zma_g4009 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.2208, evm.TU.LG14.1338 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g28920 |
| Salicaceae | Populus euphratica | 2 | populus_peu00281, populus_peu17358 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132618817 |
| Solanaceae | Solanum chilense | 1 | SOLCI007355700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107024470 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_12057 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G2463 |
| Zosteraceae | Zostera marina | 1 | Zosma01g01270.v3.1 |