Basic Information
Locus ID:
nbis-gene-38561
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00061.1 | 198466 | 199933 | + | nbis-gene-38561 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 51,656.91 Da | 47.36 | 89.06 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13768 | von Willebrand factor type A domain | 67 | 188 | 5.5E-6 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 62 | 208 | 4.45E-12 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 51 | 209 | 1.0E-17 | IPR036465 |
| SMART | SM00327 | VWA_4 | 57 | 209 | 0.001 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 469 | - | - |
| Coils | Coil | Coil | 349 | 369 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_039777425.1 | uncharacterized protein LOC120644782 [Panicum virgatum] | 0 |
| TrEMBL | A0A811RQF2 | VWFA domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS56099 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology