Basic Information
Locus ID:
nbis-gene-38491
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
ACT domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00060.1 | 1432405 | 1437668 | + | nbis-gene-38491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 19,141.61 Da | 51.91 | 82.15 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 65 | 132 | 4.8E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 133 | 5.88E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 50 | 141 | 1.3E-24 | - |
| SMART | SM00220 | serkin_6 | 5 | 166 | 0.0092 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 172 | 17.969275 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 84 | 96 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 165 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.3 | - | 0 |
| RefSeq | XP_004957676.1 | serine/threonine-protein kinase STY17 [Setaria italica] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0I0I1 | Protein kinase domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag4G01530 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.676.V1.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38491 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g25810, gene.Posoc06g14830 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014949 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107006980 |