Basic Information
Locus ID:
nbis-gene-38248
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Chromo (CHRromatin Organisation MOdifier) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00059.1 | 1669130 | 1681771 | - | nbis-gene-38248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 69,799.74 Da | 50.48 | 69.84 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.30.30.490 | - | 337 | 457 | 1.4E-34 | IPR043151 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 509 | 619 | 5.5E-26 | - |
| ProSiteProfiles | PS51038 | BAH domain profile. | 392 | 526 | 10.573649 | IPR001025 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 347 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80740.1 | chromomethylase 1. ecotype Kl-0 chromomethylase (CMT1). A plant line expressing an RNAi construct directed against DMT4 has reduced agrobacterium-mediated tumor formation. | 0 |
| RefSeq | XP_039784885.1 | DNA (cytosine-5)-methyltransferase 3-like isoform X2 [Panicum virgatum] | 0 |
| Q8LPU5 | DNA (cytosine-5)-methyltransferase 3 OS=Zea mays OX=4577 GN=DMT105 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SNN7 | DNA (cytosine-5-)-methyltransferase OS=Eragrostis curvula OX=38414 GN=EJB05_53991 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology