Basic Information
Locus ID:
nbis-gene-38139
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00059.1 | 912364 | 914421 | + | nbis-gene-38139 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 74,155.96 Da | 55.61 | 63.91 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 501 | 577 | 9.32736E-48 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 55 | 235 | 5.3E-49 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 508 | 553 | 1.4E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 503 | 573 | 3.27E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 496 | 581 | 7.0E-17 | IPR036638 |
| SMART | SM00353 | finulus | 510 | 559 | 5.6E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 504 | 553 | 17.389959 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 338 | - | - |
| Coils | Coil | Coil | 550 | 577 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | NP_001335485.1 | myc transcription factor 7 [Zea mays] | 0 |
| Q336P5 | Transcription factor MYC2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A317YDJ7 | Transcription factor MYC2 OS=Zea mays OX=4577 GN=MYC2_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology