Basic Information
Locus ID:
nbis-gene-3797
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 2588604 | 2593733 | - | nbis-gene-3797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 35,366.54 Da | 37.58 | 78.58 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 221 | 268 | 1.0E-10 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 220 | 276 | 1.25E-14 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 44 | 221 | 1.88E-15 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 202 | 286 | 4.0E-16 | - |
| SMART | SM00326 | SH3_2 | 217 | 272 | 2.2E-9 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 214 | 273 | 16.87644 | IPR001452 |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 156 | 190 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.3 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_006649811.1 | SH3 domain-containing protein 2-like [Oryza brachyantha] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WI39 | SH3 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_07241 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology