Basic Information
Locus ID:
nbis-gene-37647
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00058.1 | 389445 | 400562 | + | nbis-gene-37647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 76,085.87 Da | 51.21 | 77.90 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 90 | 189 | 2.42101E-7 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 448 | 648 | 4.40219E-101 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 557 | 648 | 4.5E-22 | IPR001245 |
| Pfam | PF13426 | PAS domain | 104 | 190 | 1.3E-9 | IPR000014 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 648 | 2.63E-64 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 93 | 185 | 9.25E-15 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 557 | 674 | 1.3E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 431 | 464 | 1.4E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 556 | 1.5E-16 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 93 | 194 | 3.7E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 499 | 8.9E-10 | - |
| SMART | SM00220 | serkin_6 | 442 | 656 | 6.0E-34 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 103 | 189 | 1.3E-9 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 651 | 24.795996 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 105 | 148 | 11.069136 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 538 | 550 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 241 | - | - |
| Coils | Coil | Coil | 3 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67890.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_004979969.1 | probable serine/threonine-protein kinase DDB_G0271682 isoform X1 [Setaria italica] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9IFW9 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology