Basic Information
Locus ID:
nbis-gene-37568
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00057.1 | 1789725 | 1808825 | - | nbis-gene-37568 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 185,453.84 Da | 45.27 | 98.81 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 451 | 589 | 5.88825E-4 | - |
| Pfam | PF00931 | NB-ARC domain | 449 | 693 | 1.3E-40 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 8 | 252 | 8.3E-40 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 925 | 946 | 1.1 | IPR001611 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 273 | 353 | 2.4E-7 | IPR000535 |
| SUPERFAMILY | SSF52058 | L domain-like | 1186 | 1624 | 3.23E-21 | - |
| SUPERFAMILY | SSF49354 | PapD-like | 262 | 393 | 6.54E-8 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 254 | 2.32E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 778 | 1261 | 4.76E-57 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 432 | 706 | 7.56E-54 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 806 | 1023 | 9.2E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 261 | 1.4E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1041 | 1268 | 3.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 436 | 597 | 7.8E-30 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1519 | 1636 | 8.4E-20 | IPR032675 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 262 | 392 | 4.0E-14 | IPR013783 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1278 | 1487 | 2.1E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 686 | 789 | 2.6E-9 | IPR036388 |
| SMART | SM00220 | serkin_6 | 3 | 255 | 1.7E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 259 | 30.718142 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 258 | 388 | 11.324582 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 108 | 120 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 471 | 486 | 1.2E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1213 | 1229 | 1.2E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 639 | 653 | 1.2E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 542 | 556 | 1.2E-20 | - |
| Coils | Coil | Coil | 1297 | 1317 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_034569209.1 | uncharacterized protein LOC117833724 isoform X1 [Setaria viridis] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9USE9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_29302 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology