Basic Information
Locus ID:
nbis-gene-37072
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00056.1 | 890287 | 895003 | - | nbis-gene-37072 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 30,362.40 Da | 37.97 | 65.00 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 53 | 97 | 3.3E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 214 | 7.11E-43 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 43 | 253 | 2.3E-48 | - |
| SMART | SM00220 | serkin_6 | 19 | 211 | 1.2E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 202 | 11.835118 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 25 | 48 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 61 | 73 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23340.1 | casein kinase I-like 10. | 0 |
| RefSeq | XP_021318648.1 | casein kinase 1-like isoform X2 [Sorghum bicolor] | 0 |
| Q9LW62 | Casein kinase 1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=CKL10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D6E665 | Casein kinase 1-like protein 6 (Fragment) OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d003049 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 13 | Sgl03985, Sgl04062, Sgl09052, Sgl09126, Sgl64894, Sgl65522 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2727.V1.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-37072 |