halophFGD

Basic Information

Locus ID: nbis-gene-37010

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: Belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00056.1	637611	640850	+	nbis-gene-37010

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.48	13,534.07 Da	39.77	87.93	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	34	101	1.1E-13	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	28	101	2.56E-21	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	3	102	1.0E-21	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	121	15.170742	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	37	49	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G11520.1	calmodulin-binding receptor-like cytoplasmic kinase 3. high overall homology to CRCK1
RefSeq	XP_015636085.1	calmodulin-binding receptor-like cytoplasmic kinase 3 [Oryza sativa Japonica Group]
Swiss-Prot	Q9ASQ5	Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRCK3 PE=2 SV=1
TrEMBL	B7EF14	cDNA clone:J013156I11, full insert sequence OS=Oryza sativa subsp. japonica OX=39947 PE=2 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Zoysia japonica	1	nbis-gene-37010
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_6_RagTag.328, evm.TU.Scaffold_6_RagTag.406