Basic Information
Locus ID:
nbis-gene-36810
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
SNF1-related protein kinase catalytic subunit alpha
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00055.1 | 1638413 | 1647037 | + | nbis-gene-36810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 12,239.17 Da | 39.86 | 80.94 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02149 | Kinase associated domain 1 | 63 | 105 | 9.1E-11 | IPR001772 |
| SUPERFAMILY | SSF103243 | KA1-like | 1 | 105 | 1.41E-21 | IPR028375 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 1 | 104 | 6.6E-19 | - |
| ProSiteProfiles | PS50032 | Kinase associated domain 1 (KA1) profile. | 57 | 105 | 13.783545 | IPR001772 |
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01090.1 | SNF1 kinase homolog 10. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | 0 |
| RefSeq | XP_037420548.1 | serine/threonine protein kinase OSK4-like [Triticum dicoccoides] | 0 |
| B8BBT7 | Serine/threonine protein kinase OSK4 OS=Oryza sativa subsp. indica OX=39946 GN=OSK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A453IBB7 | non-specific serine/threonine protein kinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011978 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035472 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC3AG069740, gene_TRIDC3BG078840 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS3D02G491700.1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-36810, nbis-gene-36814 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.174 |