Basic Information
Locus ID:
nbis-gene-36229
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00053.1 | 682918 | 686163 | - | nbis-gene-36229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 38,351.96 Da | 45.84 | 92.94 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 174 | 320 | 1.4E-16 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 173 | 310 | 3.92E-18 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 171 | 352 | 3.0E-20 | IPR036259 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 184 | 201 | - | IPR005829 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 340 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.2 | - | 0 |
| RefSeq | XP_025793850.1 | multidrug resistance protein 1 isoform X2 [Panicum hallii] | 0 |
| TrEMBL | A0A5J9V7B2 | MFS domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_23526 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology