Basic Information
Locus ID:
nbis-gene-3608
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 1788938 | 1793339 | + | nbis-gene-3608 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 41,915.29 Da | 35.28 | 91.47 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 50 | 213 | 7.08872E-87 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 49 | 219 | 5.5E-31 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 270 | 382 | 8.57E-16 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 49 | 227 | 3.33E-39 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 46 | 222 | 3.0E-54 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 235 | 369 | 3.2E-24 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_004984863.1 | pyruvate decarboxylase 2 [Setaria italica] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9WJF6 | pyruvate decarboxylase OS=Eragrostis curvula OX=38414 GN=EJB05_07004 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology