Basic Information
Locus ID:
nbis-gene-35742
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00051.1 | 1268914 | 1274955 | - | nbis-gene-35742 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 87,877.78 Da | 48.03 | 78.02 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 628 | 782 | 8.57699E-65 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 164 | 781 | 1.3E-81 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 162 | 783 | 1.3E-108 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 591 | 784 | 4.1E-56 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 154 | 387 | 1.3E-65 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 164 | 784 | 55.610321 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 165 | 180 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 726 | 743 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 518 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_004958954.1 | ubiquitin carboxyl-terminal hydrolase 8 [Setaria italica] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A811N9Q3 | Ubiquitin carboxyl-terminal hydrolase OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS14530 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology